What We Do

We use comprehensive and cutting edge quantitative methods paired with efficient informatics techniques to solve complex scientific challenges.

Who We Are

We are a light hearted, hardworking, multi-disciplinary team of scientists who enjoy diverse technical challenges and love to work in a team. We share a passion for varied scientific disciplines and we love to learn, experiment and innovate.

Who We Serve

We serve a variety of US Federal Government agencies, pharmaceutical and biotechnology companies, non-profit research organizations and academic institutes.

Software We Support

We support SWIFT-Review, Active Screener, FIDDLE, BMDExpress 2.0 and the Risk21 Roadmap Visualization tool (RRV).

Publications and Presentations

We regularly publish in scientific journals and present our work to audiences around the world.

Latest News

Catch up with the latest news and events at Sciome.

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About Us

Sciome LLC is an innovative research and technology consulting company providing state of the art informatics solutions for the life sciences industry. We specialize in developing and deploying novel bioinformatics, cheminformatics, text-mining and data science solutions for researchers in government, academic and private sector organizations.

High throughput technologies are routinely used to study genomes, proteomes and metabolomes creating a deluge of scientific data. In addition, large volumes of data are available via electronic health records, clinical study reports, government reports, high content images, and the ever increasing amount of scientific literature in peer reviewed journals and on the World Wide Web. Success of scientific endeavors in such data rich environments greatly depends on the careful exploration and interpretation of this data. This has created a large demand for sophisticated tools and highly skilled expertise to enable data-driven discovery.

Our goal is to provide cutting edge, customized and cost effective informatics solutions for efficient data management, data analyses and interpretation. We develop novel quantitative methodologies, design and deliver intuitive software tools, and deploy efficient computational techniques to enable timely and insightful discoveries.

Our mission is to enable science via analytical informatics.

What We Do

We use comprehensive and cutting edge quantitative methods paired with efficient informatics techniques to solve complex scientific challenges. We work with our clients at all stages of the life science discovery process, starting with hypotheses generation and experiment design, through data analysis using off-the-shelf and custom designed methodologies and culminating with expert help in interpretation of the results. We also provide detailed support for manuscript preparation, formulation of reports, and aid in the dissemination of information using print or online medium for projects that cover a variety of scientific disciplines. Our consulting team includes PhD level Bioinformatics Scientists, Statisticians, Toxicologists and Computer Scientists with a wide array of experience in government contracting, academic research and the pharmaceutical industry.

Bioinformatics and Biostatistics
  • Next Generation Sequence data analysis
  • Microarray data analysis
  • Structural & Functional genomics
  • SNP/Genotype analysis & GWAS
  • Biostatistics and Mathematical Modeling
Cheminformatics
  • Quantitative Structure-Activity Relationship (QSAR) modeling
  • Computational Toxicity Predictions
  • Active site and Protein-Protein Docking
  • Pharmacophore Modeling
Software Development
  • Requirements gathering
  • Software architecture design
  • User interface design
  • Implementation, deployment and maintenance
  • User support
Text-Mining
  • Document Tagging and Visualization
  • Full-Text Conversion and Search
  • Document Clustering, Ranking & Classification
  • Literature Prioritization and Screening
  • Data extraction
  • Web mining and information retrieval
Data Analytics
  • Integration and visualization of large volumes of heterogeneous data
  • Development and implementation of Deep learning methodologies for predictive science
  • Data mining using machine learning for prioritization or classification
  • Automated Image analysis using artificial intelligence
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Who We Are

We are a light hearted, hardworking, multi-disciplinary team of scientists who enjoy diverse technical challenges and love to work in a team. We share a passion for varied scientific disciplines and we love to learn, experiment and innovate.

Sciome Team Photo

The Sciome Team

Our team has a diverse background in helping organizations and individual scientists succeed in solving scientific challenges.

  • Half our team members have PhDs in disciplines such as Bioinformatics, Statistics, Chemistry and Toxicology. More than 80% of our team members possess a Master’s degree.
  • Our team represents more than 110 years of combined work experience in scientific consulting, software development and research.
  • We publish routinely in high impact scientific journals (over 100 publications) such as Nature, Science, Nature Genetics and many more.
  • We present at varied scientific conferences, develop interactive scientific software applications and participate in collaborative scientific endeavors.

We develop novel quantitative methodologies, design and deliver intuitive software tools, and deploy efficient computational techniques to enable timely and insightful discoveries.

Who We Serve

We get hired to solve complex, unique and/or recurring scientific challenges. Our consulting engagements range from multiyear research endeavors in support of environmental or health related topics to short term data mining projects in support of specific scientific pursuits. We continue to serve a variety of US Federal Government agencies, pharmaceutical and biotechnology companies, non-profit research organizations and academic institutes.

21st Century Creations     +     Argos     +     Endacea
     Family Health Network     +     First Flight     +     GSK     +     ILS Genomics
Scikon Innovations     +     Social & Scientific Systems, Inc.

Software We Support

SWIFT-Review
SWIFT-Active Screener
FIDDLE
BMDExpress 2.0
RRV (Risk21 Roadmap Visualization tool)

Latest Publications

Shimbo T, Dunnick JK, Brix A, Mav D, Shah RR, Wade PA (2016). “DNA methylation changes in a mouse model of exposure to polybrominated diphenyl ethers.” Submited to Toxicology Letters.

Glynn C, Tokdar S, Banks D, Howard BE (2016). “Bayesian Analysis of Dynamic Linear Topic Models.” (submitted).

Howard BE, Phillips J, Miller K, Tandon A, Mav D, Shah MR, Holmgren S, Pelch KE, Rooney AA, Macleod M, Shah RR, Thayer K (2016). “SWIFT-Review: A Text-mining Workbench for Systematic Review.” Syst Rev. 2016 May 23;5(1):87. doi: 10.1186/s13643-016-0263-z.

Singh A, Foley J, Rubino M, Boyle M, Shah R, Tandon A, Archer T (2016). “BRG1 enables rapid growth of the early embryo by suppressing genes that regulate apoptosis and cell growth arrest.” Mol Cell Biol. 2016 May 16. pii: MCB.01101-15

 

Recio L, Phillips S, Davis J, Shah R, Marroni D, Friedman M (2016). “Transcriptional Profiling in Testes of Rats Exposed to Acrylamide Reveals Actin Filaments, Protein Catabolism and Cell Proliferation” Society of Toxicology Meeting, New Orleans, Louisiana, March 13—17, 2016.

R Shah (2016). “Integration of Epigenomics Data with Other “-Omics” Datasets in Translational Toxicology Studies.” Society of Toxicology Meeting, New Orleans, Louisiana, March 13—17, 2016.

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919-338-2177 | 2 Davis Drive, Research Triangle Park, NC 27709, USA

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